CRAN Package Check Results for Package EpiCurve

Last updated on 2020-04-09 01:53:11 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2.2-1 6.34 56.21 62.55 ERROR
r-devel-linux-x86_64-debian-gcc 2.2-1 5.53 42.52 48.05 ERROR
r-devel-linux-x86_64-fedora-clang 2.2-1 75.31 ERROR
r-devel-linux-x86_64-fedora-gcc 2.2-1 81.29 ERROR
r-devel-windows-ix86+x86_64 2.2-1 14.00 66.00 80.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 2.2-1 15.00 62.00 77.00 ERROR
r-patched-linux-x86_64 2.2-1 6.35 52.83 59.18 ERROR
r-patched-solaris-x86 2.2-1 107.00 ERROR
r-release-linux-x86_64 2.2-1 4.67 65.06 69.73 OK
r-release-windows-ix86+x86_64 2.2-1 12.00 120.00 132.00 OK
r-release-osx-x86_64 2.2-1 OK
r-oldrel-windows-ix86+x86_64 2.2-1 10.00 113.00 123.00 OK
r-oldrel-osx-x86_64 2.2-1 OK

Check Details

Version: 2.2-1
Check: examples
Result: ERROR
    Running examples in 'EpiCurve-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: EpiCurve
    > ### Title: Plot an Epidemic Curve
    > ### Aliases: EpiCurve
    > ### Keywords: ~documentation
    >
    > ### ** Examples
    >
    > # library(Epicurve)
    > date <- seq(as.timeDate("2017-05-10 21:35:22"), as.timeDate("2017-05-12 06:15:12"), by="12 min")
    > val <- rep(1, length(date))
    > tri <- rep(c("Alive", "Died","Unknown"), length.out=length(date))
    > DF <- data.frame(date, val, tri)
    > names(DF) <- c("date","value", "tri")
    >
    >
    > EpiCurve(DF,
    + date = "date",
    + freq = "value",
    + period = "hour",
    + split = 4,
    + cutvar = "tri",
    + ylabel="Number of cases",
    + xlabel= "From 2017-05-10 21:35:22 To 2017-05-12 06:15:12",
    + title = "Epidemic Curve")
    Error: Column `DateFactor` is unknown
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 2.2-1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'EpiCurve.Rmd' using rmarkdown
    Loading required package: ggplot2
    Loading required package: dplyr
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required package: ISOweek
    Loading required package: scales
    Quitting from lines 149-156 (EpiCurve.Rmd)
    Error: processing vignette 'EpiCurve.Rmd' failed with diagnostics:
    Column `DateFactor` is unknown
    --- failed re-building 'EpiCurve.Rmd'
    
    SUMMARY: processing the following file failed:
     'EpiCurve.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 2.2-1
Check: examples
Result: ERROR
    Running examples in ‘EpiCurve-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: EpiCurve
    > ### Title: Plot an Epidemic Curve
    > ### Aliases: EpiCurve
    > ### Keywords: ~documentation
    >
    > ### ** Examples
    >
    > # library(Epicurve)
    > date <- seq(as.timeDate("2017-05-10 21:35:22"), as.timeDate("2017-05-12 06:15:12"), by="12 min")
    > val <- rep(1, length(date))
    > tri <- rep(c("Alive", "Died","Unknown"), length.out=length(date))
    > DF <- data.frame(date, val, tri)
    > names(DF) <- c("date","value", "tri")
    >
    >
    > EpiCurve(DF,
    + date = "date",
    + freq = "value",
    + period = "hour",
    + split = 4,
    + cutvar = "tri",
    + ylabel="Number of cases",
    + xlabel= "From 2017-05-10 21:35:22 To 2017-05-12 06:15:12",
    + title = "Epidemic Curve")
    Error: Column `DateFactor` is unknown
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-solaris-x86

Version: 2.2-1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘EpiCurve.Rmd’ using rmarkdown
    Loading required package: ggplot2
    Loading required package: dplyr
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required package: ISOweek
    Loading required package: scales
    Quitting from lines 149-156 (EpiCurve.Rmd)
    Error: processing vignette 'EpiCurve.Rmd' failed with diagnostics:
    Column `DateFactor` is unknown
    --- failed re-building ‘EpiCurve.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘EpiCurve.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8

Version: 2.2-1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘EpiCurve.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: ggplot2
    Loading required package: dplyr
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    Loading required package: ISOweek
    Loading required package: scales
    Quitting from lines 149-156 (EpiCurve.Rmd)
    Error: processing vignette 'EpiCurve.Rmd' failed with diagnostics:
    Column `DateFactor` is unknown
    --- failed re-building ‘EpiCurve.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘EpiCurve.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86