CRAN Package Check Results for Package SpatMCA

Last updated on 2019-12-15 01:50:40 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1.0 52.03 44.05 96.08 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.1.0 37.93 34.49 72.42 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.1.0 128.94 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.1.0 123.58 NOTE
r-devel-windows-ix86+x86_64 1.0.1.0 86.00 111.00 197.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.0.1.0 98.00 112.00 210.00 NOTE
r-patched-linux-x86_64 1.0.1.0 36.78 39.74 76.52 NOTE
r-patched-solaris-x86 1.0.1.0 130.30 ERROR
r-release-linux-x86_64 1.0.1.0 35.32 39.82 75.14 NOTE
r-release-windows-ix86+x86_64 1.0.1.0 83.00 77.00 160.00 NOTE
r-release-osx-x86_64 1.0.1.0 NOTE
r-oldrel-windows-ix86+x86_64 1.0.1.0 78.00 74.00 152.00 NOTE
r-oldrel-osx-x86_64 1.0.1.0 NOTE

Additional issues

OpenBLAS

Check Details

Version: 1.0.1.0
Check: for GNU extensions in Makefiles
Result: NOTE
    GNU make is a SystemRequirements.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0.1.0
Check: use of SHLIB_OPENMP_*FLAGS in Makefiles
Result: NOTE
     src/Makevars.win: SHLIB_OPENMP_CXXFLAGS is included in PKG_CXXFLAGS but not in PKG_LIBS
     src/Makevars.win: SHLIB_OPENMP_CFLAGS is included in PKG_LIBS but linking is by C++
    Use of these macros is discussed in sect 1.2.1.1 of 'Writing R
    Extensions'. The macros for different languages may differ so the
    matching macro must be used in PKG_CXXFLAGS (etc) and match that used
    in PKG_LIBS (except for Fortran: see the manual).
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.1.0
Check: examples
Result: ERROR
    Running examples in ‘SpatMCA-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: spatmca
    > ### Title: Regularized spatial MCA
    > ### Aliases: spatmca
    >
    > ### ** Examples
    >
    > ############### 1D: regular locations ################################
    > p <- q <- 20
    > n <- 100
    > x1 <- matrix(seq(-7, 7, length = p), nrow = p, ncol = 1)
    > x2 <- matrix(seq(-7, 7, length = q), nrow = q, ncol = 1)
    > u <- exp(-x1^2)/norm(exp(-x1^2), "F")
    > v <- exp(-(x2 - 2)^2)/norm(exp(-(x2 - 2)^2), "F")
    > Sigma <- array(0, c(p + q, p + q))
    > Sigma[1:p, 1:p] <- diag(p)
    > Sigma[(p + 1):(p + q), (p + 1):(p + q)] <- diag(p)
    > Sigma[1:p, (p + 1):(p + q)] <- u%*%t(v)
    > Sigma[(p + 1):(p + q), 1:p] <- t(Sigma[1:p, (p + 1):(p + q)])
    > noise <- MASS::mvrnorm(n, mu = rep(0, p + q), Sigma = 0.001*diag(p + q))
    > Y <- MASS:::mvrnorm(n, mu = rep(0, p + q), Sigma = Sigma) + noise
    > Y1 <- Y[,1:p]
    > Y2 <- Y[,-(1:p)]
    > cv1 <- spatmca(x1, x2, Y1, Y2)
    
     *** caught segfault ***
    address 17d48828, cause 'memory not mapped'
Flavor: r-patched-solaris-x86