CRAN Package Check Results for Package TropFishR

Last updated on 2020-07-08 01:49:43 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.2 19.50 123.69 143.19 OK --no-vignettes
r-devel-linux-x86_64-debian-gcc 1.6.2 17.16 93.29 110.45 OK --no-vignettes
r-devel-linux-x86_64-fedora-clang 1.6.2 862.07 NOTE
r-devel-linux-x86_64-fedora-gcc 1.6.2 821.47 NOTE
r-devel-windows-ix86+x86_64 1.6.2 33.00 178.00 211.00 OK --no-vignettes
r-patched-linux-x86_64 1.6.2 14.75 123.59 138.34 OK --no-vignettes
r-patched-solaris-x86 1.6.2 1488.20 NOTE
r-release-linux-x86_64 1.6.2 15.15 122.34 137.49 OK --no-vignettes
r-release-osx-x86_64 1.6.2 WARN
r-release-windows-ix86+x86_64 1.6.2 36.00 149.00 185.00 OK --no-vignettes
r-oldrel-osx-x86_64 1.6.2 NOTE
r-oldrel-windows-ix86+x86_64 1.6.2 40.00 171.00 211.00 OK --no-vignettes

Check Details

Version: 1.6.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘Hmisc’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.6.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘Using_TropFishR_ELEFAN_functions.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'Using_TropFishR_ELEFAN_functions.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘Using_TropFishR_ELEFAN_functions.Rmd’
    
    --- re-building ‘lfqData.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'lfqData.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘lfqData.Rmd’
    
    --- re-building ‘tutorial.Rmd’ using rmarkdown
    Warning in VPA(param = synLFQ7c, terminalF = synLFQ7c$FM, analysis_type = "CA", :
     You did not specify catch_unit. The Method assumes that catch is provided in numbers!
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'tutorial.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘tutorial.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘Using_TropFishR_ELEFAN_functions.Rmd’ ‘lfqData.Rmd’ ‘tutorial.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64