CRAN Package Check Results for Package amt

Last updated on 2020-08-14 01:48:55 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.2 0.61 2.61 3.22 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.2 52.11 190.64 242.75 OK
r-devel-linux-x86_64-fedora-clang 0.1.2 410.51 NOTE
r-devel-linux-x86_64-fedora-gcc 0.1.2 409.18 OK
r-devel-windows-ix86+x86_64 0.1.2 184.00 386.00 570.00 OK
r-patched-linux-x86_64 0.1.2 57.75 251.30 309.05 OK
r-patched-solaris-x86 0.1.2 509.70 OK
r-release-linux-x86_64 0.1.2 57.00 252.87 309.87 OK
r-release-macos-x86_64 0.1.2 OK
r-release-windows-ix86+x86_64 0.1.2 186.00 523.00 709.00 ERROR
r-oldrel-macos-x86_64 0.1.2 OK
r-oldrel-windows-ix86+x86_64 0.1.2 127.00 342.00 469.00 OK

Check Details

Version: 0.1.2
Check: package dependencies
Result: ERROR
    Packages required but not available: 'broom', 'tidyr'
    
    Package suggested but not available for checking: 'moveHMM'
    
    See section 'The DESCRIPTION file' in the 'Writing R Extensions'
    manual.
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.1.2
Check: package dependencies
Result: NOTE
    Imports includes 23 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.2
Check: running tests for arch ‘i386’
Result: ERROR
     Running 'tinytest.R' [23s]
    Running the tests in 'tests/tinytest.R' failed.
    Complete output:
     >
     > if ( requireNamespace("tinytest", quietly=TRUE) ){
     + tinytest::test_package("amt")
     + }
    
     Attaching package: 'amt'
    
     The following object is masked from 'package:stats':
    
     filter
    
    
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests
    
     Running test_crs.R.................... 0 tests
     Attaching package: 'lubridate'
    
     The following objects are masked from 'package:base':
    
     date, intersect, setdiff, union
    
    
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests .t found, creating `track_xyt`.
    
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 12 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 13 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 14 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 15 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 16 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 17 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 18 tests <1b>[0;32mOK<1b>[0m
    
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 11 tests <1b>[0;32mOK<1b>[0m
     Loading required package: sp
    
     Attaching package: 'sp'
    
     The following object is masked from 'package:amt':
    
     bbox
    
    
     Attaching package: 'raster'
    
     The following object is masked from 'package:amt':
    
     select
    
    
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests .t missing, creating `track_xy`.
    
     Running test_extract_covariates.R..... 0 tests .t found, creating `track_xyt`.
    
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 12 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 13 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 14 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 15 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 16 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 17 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 18 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 19 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 20 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 21 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 22 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 23 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 24 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 25 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 26 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 27 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 28 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 29 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 30 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 31 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 32 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 33 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 34 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 35 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 36 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 37 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 38 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 39 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 40 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 41 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 42 tests <1b>[0;32mOK<1b>[0m
    
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_fit_ctmm.R............... 0 tests Minimum sampling interval of 24 hours in unknown
    
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_fit_ctmm.R............... 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 4 tests <1b>[0;32mOK<1b>[0m ff is invalid
    
     Running test_hr.R..................... 5 tests <1b>[0;32mOK<1b>[0m ff is invalid
    
     Running test_hr.R..................... 6 tests <1b>[0;32mOK<1b>[0m Error in h(simpleError(msg, call)) :
     error in evaluating the argument 'obj' in selecting a method for function 'coordinates': coordinate operation creation failed: generic error of unknown origin
     Calls: <Anonymous> ... hr_akde.track_xyt -> grepl -> tolower -> summary -> fit_ctmm
     In addition: Warning messages:
     1: In as.telemetry.data.frame(data.frame(lon = x$x_, lat = x$y_, timestamp = x$t_)) :
     No MoveBank identification found. Assuming data corresponds to one indiviudal.
     2: In data(fisher) : data set 'fisher' not found
     3: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
     but +towgs84= values preserved
     4: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
     but +towgs84= values preserved
     5: In RGEOSUnaryPredFunc(spgeom, byid, "rgeos_isvalid") :
     Self-intersection at or near point 1783005.5901911343 2406494.2820731727
     6: In rgeos::gUnaryUnion(ff) :
     Invalid objects found; consider using set_RGEOS_CheckValidity(2L)
     7: In RGEOSUnaryPredFunc(spgeom, byid, "rgeos_isvalid") :
     Self-intersection at or near point 1783005.5901911343 2406494.2820731727
     8: In rgeos::gUnaryUnion(ff) :
     Invalid objects found; consider using set_RGEOS_CheckValidity(2L)
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 0.1.2
Check: running tests for arch ‘x64’
Result: ERROR
     Running 'tinytest.R' [24s]
    Running the tests in 'tests/tinytest.R' failed.
    Complete output:
     >
     > if ( requireNamespace("tinytest", quietly=TRUE) ){
     + tinytest::test_package("amt")
     + }
    
     Attaching package: 'amt'
    
     The following object is masked from 'package:stats':
    
     filter
    
    
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_as_track.R............... 0 tests
    
     Running test_crs.R.................... 0 tests
     Attaching package: 'lubridate'
    
     The following objects are masked from 'package:base':
    
     date, intersect, setdiff, union
    
    
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests .t found, creating `track_xyt`.
    
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 0 tests
     Running test_crs.R.................... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 12 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 13 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 14 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 15 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 16 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 17 tests <1b>[0;32mOK<1b>[0m
     Running test_crs.R.................... 18 tests <1b>[0;32mOK<1b>[0m
    
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 0 tests
     Running test_distributions.R.......... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_distributions.R.......... 11 tests <1b>[0;32mOK<1b>[0m
     Loading required package: sp
    
     Attaching package: 'sp'
    
     The following object is masked from 'package:amt':
    
     bbox
    
    
     Attaching package: 'raster'
    
     The following object is masked from 'package:amt':
    
     select
    
    
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests .t missing, creating `track_xy`.
    
     Running test_extract_covariates.R..... 0 tests .t found, creating `track_xyt`.
    
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 0 tests
     Running test_extract_covariates.R..... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 4 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 5 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 6 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 7 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 8 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 9 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 10 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 11 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 12 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 13 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 14 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 15 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 16 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 17 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 18 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 19 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 20 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 21 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 22 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 23 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 24 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 25 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 26 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 27 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 28 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 29 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 30 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 31 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 32 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 33 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 34 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 35 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 36 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 37 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 38 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 39 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 40 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 41 tests <1b>[0;32mOK<1b>[0m
     Running test_extract_covariates.R..... 42 tests <1b>[0;32mOK<1b>[0m
    
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 0 tests .t found, creating `track_xyt`.
    
     Running test_fit_ctmm.R............... 0 tests Minimum sampling interval of 24 hours in unknown
    
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 0 tests
     Running test_fit_ctmm.R............... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_fit_ctmm.R............... 2 tests <1b>[0;32mOK<1b>[0m
    
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 0 tests
     Running test_hr.R..................... 1 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 2 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 3 tests <1b>[0;32mOK<1b>[0m
     Running test_hr.R..................... 4 tests <1b>[0;32mOK<1b>[0m ff is invalid
    
     Running test_hr.R..................... 5 tests <1b>[0;32mOK<1b>[0m ff is invalid
    
     Running test_hr.R..................... 6 tests <1b>[0;32mOK<1b>[0m Error in h(simpleError(msg, call)) :
     error in evaluating the argument 'obj' in selecting a method for function 'coordinates': coordinate operation creation failed: generic error of unknown origin
     Calls: <Anonymous> ... hr_akde.track_xyt -> grepl -> tolower -> summary -> fit_ctmm
     In addition: Warning messages:
     1: In as.telemetry.data.frame(data.frame(lon = x$x_, lat = x$y_, timestamp = x$t_)) :
     No MoveBank identification found. Assuming data corresponds to one indiviudal.
     2: In data(fisher) : data set 'fisher' not found
     3: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
     but +towgs84= values preserved
     4: In showSRID(uprojargs, format = "PROJ", multiline = "NO") :
     Discarded datum Unknown based on GRS80 ellipsoid in CRS definition,
     but +towgs84= values preserved
     5: In RGEOSUnaryPredFunc(spgeom, byid, "rgeos_isvalid") :
     Self-intersection at or near point 1783005.5901911343 2406494.2820731727
     6: In rgeos::gUnaryUnion(ff) :
     Invalid objects found; consider using set_RGEOS_CheckValidity(2L)
     7: In RGEOSUnaryPredFunc(spgeom, byid, "rgeos_isvalid") :
     Self-intersection at or near point 1783005.5901911343 2406494.2820731727
     8: In rgeos::gUnaryUnion(ff) :
     Invalid objects found; consider using set_RGEOS_CheckValidity(2L)
     Execution halted
Flavor: r-release-windows-ix86+x86_64