CRAN Package Check Results for Package datelife

Last updated on 2022-12-08 01:52:09 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6.5 20.52 97.28 117.80 OK
r-devel-linux-x86_64-debian-gcc 0.6.5 17.51 73.73 91.24 OK
r-devel-linux-x86_64-fedora-clang 0.6.5 166.76 ERROR
r-devel-linux-x86_64-fedora-gcc 0.6.5 161.70 NOTE
r-devel-windows-x86_64 0.6.5 62.00 163.00 225.00 OK
r-patched-linux-x86_64 0.6.5 28.41 86.24 114.65 OK
r-release-linux-x86_64 0.6.5 18.58 85.08 103.66 OK
r-release-macos-arm64 0.6.5 58.00 NOTE
r-release-macos-x86_64 0.6.5 68.00 NOTE
r-release-windows-x86_64 0.6.5 105.00 138.00 243.00 OK
r-oldrel-macos-arm64 0.6.5 42.00 NOTE
r-oldrel-macos-x86_64 0.6.5 67.00 NOTE
r-oldrel-windows-ix86+x86_64 0.6.5 37.00 122.00 159.00 OK

Check Details

Version: 0.6.5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘msa’
    
    Imports includes 21 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.6.5
Check: data for non-ASCII characters
Result: NOTE
     Note: found 2596 marked UTF-8 strings
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64

Version: 0.6.5
Check: examples
Result: ERROR
    Running examples in ‘datelife-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: get_ott_children
    > ### Title: Use this instead of 'rotl::tol_subtree()' when taxa are not in
    > ### synthesis tree and you still need to get all species or an induced
    > ### OpenTree subtree
    > ### Aliases: get_ott_children
    >
    > ### ** Examples
    >
    > # An example with the dog genus:
    >
    > # It is currently not possible to get an OpenTree subtree of a taxon that is
    > # missing from the OpenTree synthetic tree.
    > # The dog genus is not monophyletic in the OpenTree synthetic tree, so in
    > # practice, it has no node to extract a subtree from.
    > tnrs <- tnrs_match("Canis")
    
     |
     | | 0%
     |
     |======================================================================| 100%
    >
    > ## Not run:
    > ##D # This is a flag for package development. You are welcome to run the example.
    > ##D rotl::tol_subtree(tnrs$ott_id[1])
    > ##D #> Error: HTTP failure: 400
    > ##D #> [/v3/tree_of_life/subtree] Error: node_id was not found (broken taxon).
    > ##D
    > ## End(Not run) # end dontrun
    >
    > ids <- tnrs$ott_id[1]
    > names(ids) <- tnrs$unique_name
    > children <- get_ott_children(ott_ids = ids) # or
    
     |
     | | 0%No internet connection or the Open Tree of Life's API is down.
    
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.6.5
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘msa’
Flavors: r-devel-linux-x86_64-fedora-gcc, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64