AlphaPart: Partition/Decomposition of Additive Genetic Values by Paths of Information

Additive genetic (breeding) value represents a sum of additive gene effects over whole genome and can be inferred from phenotype values of relatives via pedigree based mixed models. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>.

Version: 0.7.0
Imports: directlabels (≥ 1.1), gdata (≥ 2.6.0), ggplot2 (≥ 0.8.9), pedigree (≥ 1.3.1), quadprog (≥ 1.5-3), Rcpp (≥ 0.9.4), reshape
LinkingTo: Rcpp
Suggests: RColorBrewer (≥ 1.0-2), truncnorm (≥ 1.0-5), knitr, rmarkdown, testthat
Published: 2019-06-27
Author: Gregor Gorjanc, Jana Obsteter
Maintainer: Gregor Gorjanc <gregor.gorjanc at roslin.ed.ac.uk>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
Materials: README
CRAN checks: AlphaPart results

Downloads:

Reference manual: AlphaPart.pdf
Vignettes: Package 'alphapartition'
Package source: AlphaPart_0.7.0.tar.gz
Windows binaries: r-devel: AlphaPart_0.7.0.zip, r-devel-gcc8: AlphaPart_0.7.0.zip, r-release: AlphaPart_0.7.0.zip, r-oldrel: AlphaPart_0.7.0.zip
OS X binaries: r-release: AlphaPart_0.7.0.tgz, r-oldrel: AlphaPart_0.7.0.tgz
Old sources: AlphaPart archive

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