MSEtool: Management Strategy Evaluation Toolkit

Simulation tools for management strategy evaluation are provided for the 'DLMtool' operating model to inform data-rich fisheries. 'MSEtool' provides complementary assessment models of varying complexity with standardized reporting, diagnostic tools for evaluating assessment models within closed-loop simulation, and helper functions for building more complex operating models and model-based management procedures.

Version: 2.0.0
Depends: R (≥ 3.3.0), DLMtool (≥ 5.3.1)
Imports: MASS, TMB, coda, corpcor, dplyr, gplots, grDevices, graphics, methods, mvtnorm, reshape2, snowfall, stats, utils, abind, rmarkdown
LinkingTo: TMB, RcppEigen
Suggests: knitr, testthat, r4ss, shiny
Published: 2020-08-06
Author: Quang Huynh [aut], Tom Carruthers [aut, cre], Adrian Hordyk [aut], Chris Grandin [ctb] (iSCAM functions)
Maintainer: Tom Carruthers <t.carruthers at oceans.ubc.ca>
BugReports: https://github.com/tcarruth/MSEtool/issues
License: GPL-3
URL: http://www.datalimitedtoolkit.org
NeedsCompilation: yes
Materials: README NEWS
CRAN checks: MSEtool results

Downloads:

Reference manual: MSEtool.pdf
Vignettes: 1a. Delay-difference and delay-differential models
1. User guide to MSEtool
1b. Statistical catch-at-age (SCA) model
2. SRA model for conditioning operating models
2a. Mathematical description of the SRA model
2b. Configuring selectivity for the SRA model
1c. Surplus production model
1d. Virtual population analysis (VPA)
3. User guide for multiMSE
Package source: MSEtool_2.0.0.tar.gz
Windows binaries: r-devel: MSEtool_2.0.0.zip, r-release: MSEtool_2.0.0.zip, r-oldrel: MSEtool_2.0.0.zip
macOS binaries: r-release: MSEtool_2.0.0.tgz, r-oldrel: MSEtool_2.0.0.tgz
Old sources: MSEtool archive

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