RDML: Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files

Imports real-time thermo cycler (qPCR) data from Real-time PCR Data Markup Language (RDML) and transforms to the appropriate formats of the 'qpcR' and 'chipPCR' packages. Contains a dendrogram visualization for the structure of RDML object and GUI for RDML editing.

Version: 1.0
Depends: R (≥ 3.2.0)
Imports: checkmate (≥ 1.6.2), data.table, pipeR, readxl, rlist (≥ 0.4), R6 (≥ 2.0.1), stringr, tools (≥ 3.2), xml2 (≥ 1.0), lubridate (≥ 1.6.0)
Suggests: chipPCR, magrittr, reshape2, qpcR, dplyr, ggplot2, knitr, kfigr, MBmca, shiny, shinyjs, shinythemes, shinyMolBio, V8, testthat
Published: 2019-06-25
DOI: 10.32614/CRAN.package.RDML
Author: Konstantin A. Blagodatskikh [cre, aut], Stefan Roediger [aut], Michal Burdukiewicz ORCID iD [aut], Andrej-Nikolai Spiess [aut]
Maintainer: Konstantin A. Blagodatskikh <k.blag at yandex.ru>
License: MIT + file LICENSE
URL: https://github.com/kablag/RDML
NeedsCompilation: no
Citation: RDML citation info
Materials: README ChangeLog
CRAN checks: RDML results


Reference manual: RDML.pdf


Package source: RDML_1.0.tar.gz
Windows binaries: r-devel: RDML_1.0.zip, r-release: RDML_1.0.zip, r-oldrel: RDML_1.0.zip
macOS binaries: r-release (arm64): RDML_1.0.tgz, r-oldrel (arm64): RDML_1.0.tgz, r-release (x86_64): RDML_1.0.tgz, r-oldrel (x86_64): RDML_1.0.tgz
Old sources: RDML archive

Reverse dependencies:

Reverse imports: shinyMolBio
Reverse suggests: chipPCR


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