fsbrain: Managing and Visualizing Brain Surface Data

Provides high-level access to neuroimaging data from standard software packages like 'FreeSurfer' <http://freesurfer.net/> on the level of subjects and groups. Load morphometry data, surfaces and brain parcellations based on atlases. Mask data using labels, load data for specific atlas regions only, and visualize data and statistical results directly in 'R'.

Version: 0.5.0
Imports: reshape, freesurferformats (≥ 0.1.14), pkgfilecache (≥ 0.1.1), rgl, squash, fields, viridis, data.table, magick, methods
Suggests: knitr, rmarkdown, testthat (≥ 2.1.0), sphereplot (≥ 1.5), misc3d, RColorBrewer, Rvcg (≥ 0.20.2), igraph, pracma
Published: 2021-09-16
Author: Tim Schäfer ORCID iD [aut, cre]
Maintainer: Tim Schäfer <ts+code at rcmd.org>
BugReports: https://github.com/dfsp-spirit/fsbrain/issues
License: MIT + file LICENSE
URL: https://github.com/dfsp-spirit/fsbrain
NeedsCompilation: no
Citation: fsbrain citation info
CRAN checks: fsbrain results

Documentation:

Reference manual: fsbrain.pdf
Vignettes: fsbrain: Managing and Visualizing Structural Neuroimaging Data in GNU R
The fsbrain FAQ
Brain volume visualization with fsbrain

Downloads:

Package source: fsbrain_0.5.0.tar.gz
Windows binaries: r-devel: fsbrain_0.5.0.zip, r-release: fsbrain_0.5.0.zip, r-oldrel: fsbrain_0.5.0.zip
macOS binaries: r-release (arm64): fsbrain_0.5.0.tgz, r-release (x86_64): fsbrain_0.5.0.tgz, r-oldrel: fsbrain_0.5.0.tgz
Old sources: fsbrain archive

Linking:

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