scCustomize is a collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
See accompanying scCustomize website for detailed tutorials of all aspects of scCustomize functionality.
scCustomize can be installed from CRAN on all platforms. For more detailed instructions see Installation.
# Base R install.packages("scCustomize") # Using pak pak::pkg_install("scCustomize")
A full copy of the changes in each version can be found in the NEWS/ChangeLog.
I also maintain a separate development branch* that can be installed by supplying
ref = "develop" in the devtools or
remotes installation command. Version scheme vX.X.X.9yyy.
*Note: While this branch is typically mostly stable it may contain breaking issues/bugs.
I do try and keep development ChangeLog up to date so it’s easier to follow changes than reading commit history.